Well, okay, so mass of a proton is bigger by like 4 orders of magnitude, so negligible.
So, say I have object A that weighs 1 grams, and object B that weighs 10,000 grams (4 orders of magnitude bigger).
The mass of object A + B = 10,000g + 00001g = 10,001g.
So percent wise, object A accounts for ( (1/10,001)*100 ) = 0.00999 percent of the total mass.
Percent wise, object B accounts for ( 10,000/10,001) * 100 ) = 99.99 percent of the total mass.
Which one is negligible?