Problem solved. I needed to match the seawater matrix to my sample wash and control standards to eliminate differences of refractive index. Here's the citation:
EPA Method 353.4
Determination of Nitrate and Nitrite in Estuarine and Coastal Waters
by Gas Segmented Continuous Flow Colorimetric Analysis
http://www.epa.gov/nerlcwww/m353_4.pdf Note: In nitrate and nitrite analysis absorbance of the _______________________________________
reagent water is higher than that of the LNSW. When
using reagent water as a wash solution, the change in
refractive index causes the absorbance of seawater to _______________________________________
become negative. To measure the absorbance due to
refractive index change in different salinity samples, Low
Nutrient Seawater must be used as a wash solution to
bring the baseline down.