Ok. Time for a list of possibles. Some of these you have probably already tried.
First, most of these UV/VIS are supplied with a holmium oxide or holmium chloride standard. These are usually run daily. To eliminate instrument malfunction, try running this standard three times and see how the absorbance varies. If it is very close, the instrument is not the issue.
Next question- what is the wavelength where you see this variation? The UV cutoff wavelength for water is in the 200 nm range. If you are seeing 0.007A variation at 200 nm, it probably isn't an issue.
On the other hand, the lowest concentration standards at higher wavelengths are typically around 0.010A. These standards always have some noise in them, but still.
It might show a problem.
Most purified water requires more than just conductivity. Frequently, Total organic carbon (TOC) is also required. If you suspect the water, see if TOC was also run. While the test is for total organic carbon, the instruments often give values for total carbon and total inorganic carbon to derive the total organic carbon value. If you suspect CO2, this test might help answer that question.
Good luck. Hope this helps.