The instrument companies are very concerned about software theft. They make it hard to deal with these kind of issues.
For example, one common trick is to place what looks like an extender on your printer port. Actually, the software checks for the presence of this extender on the computer. If it doesn't see it, it shuts down. First thing to do is see if this kind of safety device is present in your system.
The next thing is to get all you data files transfered to another computer.
This is where the telephone work comes in. You need to see what the instrument maker will let you have and what they want to charge you for. You might try their repair technician first. He can often get you started down the right path.
After that, in my case, it took total reformating and reinstallation of the software.
Most people keep backup files, but they are often not well kept. If you reinstall, you also need the custom set up done specifically for your lab. Those are often missing. Also, many equipment makers require special codes to access and install the software.