Well obviously the best way to learn is to be in the lab where others can pass down their knowledge and you can learn hands on. But if you are unable to get into a research lab yet (not surprised, most profs want you to have taken several labs before they accept you so keep at it) and are looking to get prepared for research you could check out "Advanced Practical Organic Chemistry" by J. Leonard, B. Lygo, and G. Procter. It has a great intro to doing organic reactions, purification, techniques, etc. Also, simply start reading the literature. I would suggest looking at some total synthesis papers, note what reactions look interesting/new to you, then look at the experimental to see what they did (did they heat it, hit it with light, how long does this type of reaction take, etc).