A lot of amino acids in peptide couplings are sold as HCl salts, which makes them more difficult to use in peptide couplings (if not impossible). Base is typically added to remove this acidic proton and re-activate the amine for coupling. Coupling reagents can be very hygroscopic as well, so a little base doesn't hurt to get water away from them (if you use EDC, this is often sold as an HCl salt as well so base is necessary to deprotonate it).