I don't see how high shear could possibly do anything to what you are describing - separate amino acids and (I assume) small molecule stimulants. The molecules are far too small for a blade of any sort to have any effect that any other form of efficient mixing wouldn't have.
It might be different if your amino acids aren't separate but are in protein form - then you could actually have far larger molecules. Still, these are very small compared to, say, single cells. If you have truly enormous proteins, or if there are specific protein-protein interactions that you are trying to preserve, it is within the realm of possibility that you might have some effect with a shearing blade, but I would doubt it.
If your stimulants are not small molecules but are actually ground plant material or something along those lines, then the high shear mixing might make a difference by destroying the integrity of the cells present in the mixture. Many components of cells are not stable outside of the cells and will not survive the shearing process.