It's not clear what you wish to do. A pyridine ring is more inert than the protected forms, so to protect it from further reaction, do nothing. If what you are trying to do is protect the nitrogen from causing further reaction, then alkylation would work. I think it may be easier to make an N-oxide and reduce it off, but the N-oxide will have a greater reactivity than a pyridinium salt. Probably the easiest protection of the nitrogen is with a proton, lower the pH.