While I don't electroplate gold, I am a Certified Electroplater and Finisher, so I'll take a stab at it.
Two things:
1. You don't say what type of solution you used to do the plating. Cyanide? Sulfide? Chloride? pH? I ask because they all have different current density ranges, and if your current density is too high, you'll burn the plating. You were plating at about 1 A/dm2 which is an acceptable current density for some baths, but not all.
2. I have only heard this and can't confirm it's validity, but gold seed layers on Si may not adhere that well. If you have bad adhesion of the seed layer, you will get a poor electrical connection and that will cause burns on the electroplated material as well.
These are my two best guesses as to what could've happened. By your description of the deposited metal, it sounds like a burning problem to me, and these are the two ways I see it burning.