perhaps there is a way around it,
I don't know what software your system runs on,
But whenever I encounter callibration problems i tend to cheat and outsmart the system,
if there is a mode in your software, you could manually integrate your peaks let it calculate the area for you,
and by writing down that very area, you can establish a series of different areas of different concentrations.
which you can fill down in you callibration table
that is only if the software supports manual integration ( and other ways of data analysis )