Briefly, its not really true that living things excrete a wide variety of large molecules. They can be designed to excrete only one type, either by genetic engineering, or by nature. As your reference mentions, the HA is contaminated with smaller molecules, but filtration helps with that. Also, HA is a pure compound to begin with, the product is a polymer of a variety of subunit lengths. It doesn't need to be purified more than that for the average application.