I am concerning the microscopic view of chemical reactions.
Energy of a molecule is basically classified into 2 types: kinetic energy and potential energy. Kinetic energy represents the energy for motion while the latter describe all energies inside the molecules, governing all the internal states, e.g.the bond lengths, valence angle bends, dihedral angles and etc. In terms of collision theory, reactant molecules must collide for the reaction to take place. Collisions can be effective or ineffective. A collision is effective only if the molecules collide with the right orientation and they have enough "potential" energy (activation energy). Ineffective collision occurs when either one of the criteria mentioned above does not meet.
In a collision of two molecules, energy is transfered from one to another, from kinetic to potential, and vice versa. This obeys the conservation of momentum. The transfer of energy, from one type to another, is only be chance??? Some collisions make the molecules climb up the "potential" barrier but some move away from the intermediate state ( the position at the top of the potential barrier). Once a collision involve molecules with enough potential energy and with the right orientation, the reaction occurs.
Temperature represents the average kinetic energy of the molecules. We can control the kinetic energy but not the potential energy. The reaction can be accelerated by increasing the temperature. The reason is that there will be more molecules having higher kinetic energy and then the probability of having molecules with enough potential energy will be higher, since more kinetic energy is available to be transfered to potential energy.
Energy may be lost during the course of the reaction. Some electrons are excited and release the energy in the form of photons. Energy may also be lost when molecules hit the walls of the container. But this depends on the setting of the environment.
Is this story complete and correct? And is there any stochastic process governing the occurrence of collisions?
Thanks you very much for the great help in advance!!!