I don't want to bust on you or make you feel bad, but you should have thought of this before performing your reaction so you wouldn't be left holding a flask of potentially hazardous material. This goes for everyone: for your own safety and the safety of others, please consider and research potential hazards before performing reactions.
Getting back on topic: if you add a healthy amount of 1N KOH to your waste you'll make it basically impossible for HCN to form. Furthermore, as Disco said, 100 mg of this material probably won't cause any huge problems. Be sure to mark all waste as containing cyanide before disposal and if you are still worried, talk to your environmental health and safety people.
Finally, as long as you don't have any other functional groups in your molecule which react with it, regular sodium borohydride should do the same reaction just as well without any cyanide hazard. The only reason cyanoborohydride gets used is that it is selective for immines over carbonyls.