EDC has been used to do amide couplings in aqueous solvents. Water is better than methanol, as it will not form the ester. But NMP and DMF are also fine solvents for couplings if DMSO does not work. You will need a larger excess of the coupling agents. You could also try making a pentafluorophenol ester of the acid, it can react with amines in water. There are many know methods, but all are more difficult than normal methods, and usually are only practical for one or two amide couplings.