In order of how often I used them: scifinder, beilstein, encyclopedia of reagents for organic synthesis, isi web of science, Green's protective group book, Kurti's Strategic Application of Named Reactions in Organic Synthesis, March's Advanced Organic Chem
then get yourself an rss feed reader (i use thunderbird) and start browsing the literature daily/weekly. JOC, Org Lett, JACS, Angewandte, Nature Chem, Acc Chem Res, and Chem Rev are the ones I browse daily.