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Topic: kcat/Km and kon  (Read 4671 times)

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Offline mfiguera

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kcat/Km and kon
« on: February 03, 2012, 09:09:01 PM »
Hi,

I need a bit of help with enzyme kinetics:
I am studying kinetics of binding and reaction for a kinase. From steady state analysis I get kcat/Km and from the kinetics of the interaction I get kon. The issue I have is that I have read that kon cannot be lower than kcat/Km but that is what I see in my system (several fold difference). How is this possible? What can be causing this? What is the molecular or biochemical reason why kon cannot be lower than kcat/km?
Even though I found in textbooks that kcat/Km provides the lower limit for kon and that kcat/Km upper limit is set by the rate of diffusion, I am still confused, I don't "see" the molecular basis for kon not being lower than kcat/Km.
Thank you,
mf

Offline Yggdrasil

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Re: kcat/Km and kon
« Reply #1 on: February 03, 2012, 11:12:12 PM »
Look up how KM depends on kon, koff and kcat.  This should show you why kcat/KM cannot be larger than kon.

Conceptually, in an enzyme-catalyzed reaction, the enzyme and substrate must bind before they can react.  Therefore, the reaction cannot proceed faster than the product and substrate can bind.

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