It's not so much combinations of phase that make a difference. When you add two atomic orbital wavefunctions together, you take their linear combinations to arrive at new molecule orbital wavefunctions.
That is, if the 1SA is the AO on helium A and 1SB is the AO on helium B, then the MOs are 1SA + 1SB and 1SA - 1SB. One of these is your bonding orbital and the other is your antibonding orbital. In helium, both of these are completely filled, so the overall bonding order is zero.