You're not giving enough information for us to help you. Unless you give the details of what you want to achieve (at least answer my first question in post #2), exactly what you have attempted and exactly what is going wrong, we have no data on which to base a sensible suggestion.
I realise you may not be at liberty to discuss these details publicly for IP reasons, but if that is the case then asking on a public forum is probably a waste of time - you should discuss it with your advisor and colleagues at you institution if that is the situation.